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  5. LOC_Os07g23110.1

LOC_Os07g23110.1 (ATPARP2, PARP2, LOC_Os07g23110)


Aliases : ATPARP2, PARP2, LOC_Os07g23110

Description : poly(ADP-ribose) polymerase (PARP)


Gene families : OG0001236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g23110.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00184050 ATPARP2, PARP2,... Protein modification.ADP-ribosylation.poly(ADP-ribose)... 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00081650 ATPARP1, PARP1,... Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AT2G31320 ATPARP2, PARP2 poly(ADP-ribose) polymerase 2 0.04 OrthoFinder output from all 47 species
Adi_g056249 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03764 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G070600.1 ATPARP2, PARP2,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g02974 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028029001 ATPARP1, PARP1, PP, APP Protein modification.ADP-ribosylation.poly(ADP-ribose)... 0.02 OrthoFinder output from all 47 species
Lfl_g04228 ATPARP2, PARP2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10267656g0010 ATPARP2, PARP2 poly(ADP-ribose) polymerase (PARP) 0.03 OrthoFinder output from all 47 species
MA_10431725g0010 ATPARP2, PARP2 poly(ADP-ribose) polymerase (PARP) 0.03 OrthoFinder output from all 47 species
MA_87237g0010 ATPARP2, PARP2 poly(ADP-ribose) polymerase (PARP) 0.03 OrthoFinder output from all 47 species
Solyc03g117970.4.1 ATPARP2, PARP2,... poly(ADP-ribose) polymerase (PARP) 0.06 OrthoFinder output from all 47 species
Tin_g15604 ATPARP1, PARP1, PP, APP EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009355_P001 ATPARP2, PARP2,... poly(ADP-ribose) polymerase (PARP) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
BP GO:0006471 obsolete protein ADP-ribosylation IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008893 WGR_domain 515 593
IPR004102 Poly(ADP-ribose)pol_reg_dom 627 758
IPR012982 PADR1 281 331
IPR001510 Znf_PARP 11 86
IPR001510 Znf_PARP 107 174
IPR001357 BRCT_dom 405 460
IPR012317 Poly(ADP-ribose)pol_cat_dom 773 972
No external refs found!