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  5. LOC_Os07g22720.1

LOC_Os07g22720.1 (LOC_Os07g22720)


Aliases : LOC_Os07g22720

Description : component E2 of mitochondrial pyruvate dehydrogenase complex


Gene families : OG0001304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g22720.1

Target Alias Description ECC score Gene Family Method Actions
AT3G52200 LTA3 Dihydrolipoamide acetyltransferase, long form protein 0.02 OrthoFinder output from all 47 species
Aev_g02377 LTA3 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32577 No alias EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03654 LTA3 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07518 No alias EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54724 No alias EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014103 No alias EC_2.3 acyltransferase & original description: CDS=505-2079 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016338 LTA3 EC_2.3 acyltransferase & original description: CDS=167-1756 0.02 OrthoFinder output from all 47 species
Sam_g09203 No alias EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo94277 No alias Cellular respiration.pyruvate oxidation.mitochondrial... 0.03 OrthoFinder output from all 47 species
Spa_g09523 No alias EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06556 No alias EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR004167 PSBD 263 298
IPR000089 Biotin_lipoyl 126 198
IPR001078 2-oxoacid_DH_actylTfrase 317 547
No external refs found!