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  5. LOC_Os07g19060.1

LOC_Os07g19060.1 (LOC_Os07g19060)


Aliases : LOC_Os07g19060

Description : component TRS33 of TRAPP-I/II/III complex-shared components


Gene families : OG0006397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g19060.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g01049 No alias component *(TRS33) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Aop_g02380 No alias component *(TRS33) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.22 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.04 OrthoFinder output from all 47 species
Ehy_g02114 No alias component *(TRS33) of TRAPP-I/II/III complex-shared... 0.02 OrthoFinder output from all 47 species
Msp_g08290 No alias component *(TRS33) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Smo168418 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.04 OrthoFinder output from all 47 species
Zm00001e040777_P001 Zm00001e040777 component TRS33 of TRAPP-I/II/III complex-shared components 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR007194 TRAPP_component 32 173
No external refs found!