LOC_Os07g18540.1 (LOC_Os07g18540)


Aliases : LOC_Os07g18540

Description : no hits & (original description: none)


Gene families : OG0005558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005558_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g18540.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g41270.1 LOC_Os01g41270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g13900.1 LOC_Os07g13900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e033281_P001 Zm00001e033281 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033287_P001 Zm00001e033287 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!