LOC_Os07g17540.1 (LOC_Os07g17540)


Aliases : LOC_Os07g17540

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g17540.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04140.1 LOC_Os01g04140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g18550.1 LOC_Os01g18550 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g21490.1 LOC_Os01g21490 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g28420.1 LOC_Os01g28420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os02g01420.1 LOC_Os02g01420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g08280.1 LOC_Os02g08280 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g15330.1 LOC_Os02g15330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os02g51230.1 LOC_Os02g51230 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g56780.1 LOC_Os02g56780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g20820.1 LOC_Os03g20820 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g30080.1 LOC_Os03g30080 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g03710.1 LOC_Os04g03710 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os04g11410.1 LOC_Os04g11410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g20450.1 LOC_Os04g20450 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g23280.1 LOC_Os04g23280 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g29900.1 LOC_Os04g29900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g40240.1 LOC_Os04g40240 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g43590.1 LOC_Os04g43590 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os05g10230.1 LOC_Os05g10230 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g16350.1 LOC_Os05g16350 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g19700.1 LOC_Os05g19700 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g39570.1 LOC_Os05g39570 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os06g15340.1 LOC_Os06g15340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os06g16900.1 LOC_Os06g16900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g30570.1 LOC_Os06g30570 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g03440.1 LOC_Os07g03440 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g09540.1 LOC_Os07g09540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g11430.1 LOC_Os07g11430 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g15800.1 LOC_Os07g15800 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g34200.1 LOC_Os07g34200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g04850.1 LOC_Os08g04850 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os08g04870.1 LOC_Os08g04870 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g08950.1 LOC_Os08g08950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os08g11300.1 LOC_Os08g11300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os09g01900.1 LOC_Os09g01900 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os09g09420.1 LOC_Os09g09420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g12100.1 LOC_Os09g12100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g14260.1 LOC_Os09g14260 Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os09g20130.1 LOC_Os09g20130 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g37220.1 LOC_Os09g37220 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g02010.1 LOC_Os10g02010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g06660.1 LOC_Os10g06660 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g07554.1 LOC_Os10g07554 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g19326.1 LOC_Os10g19326 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g33480.1 LOC_Os10g33480 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os11g19550.1 LOC_Os11g19550 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os11g41050.1 LOC_Os11g41050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g45490.1 LOC_Os11g45490 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g01870.1 LOC_Os12g01870 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g05240.1 LOC_Os12g05240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os12g23240.1 LOC_Os12g23240 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os12g24680.1 LOC_Os12g24680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 588 699
No external refs found!