LOC_Os02g24634.1


Description : component PsbD/D2 of PS-II reaction center complex


Gene families : OG_01_0004828 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004828_tree ,
OG_02_0003703 (LandPlants) Phylogenetic Tree(s): OG_02_0003703_tree ,
OG_03_0002946 (SeedPlants) Phylogenetic Tree(s): OG_03_0002946_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g24634.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00106890 evm_27.TU.AmTr_v1... Photosystem II D2 protein OS=Amborella trichopoda 0.06 Archaeplastida
ATCG00270 PSBD photosystem II reaction center protein D 0.07 Archaeplastida
GSVIVT01010924001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.05 Archaeplastida
GSVIVT01029661001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.04 Archaeplastida
Gb_06825 No alias no description available(sp|q85ac9|psbd_antag : 421.0) 0.02 Archaeplastida
Gb_41667 No alias component PsbD/D2 of PS-II reaction center complex.... 0.12 Archaeplastida
Smo137879 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.12 Archaeplastida
Zm00001e015953_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.1 Archaeplastida
Zm00001e042043_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042109_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042158_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042173_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 Archaeplastida
Zm00001e042427_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.1 Archaeplastida
AMTR_s00102p00106890 evm_27.TU.AmTr_v1... Photosystem II D2 protein OS=Amborella trichopoda 0.06 LandPlants
ATCG00270 PSBD photosystem II reaction center protein D 0.07 LandPlants
GSVIVT01010924001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.05 LandPlants
GSVIVT01029661001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.04 LandPlants
Gb_06825 No alias no description available(sp|q85ac9|psbd_antag : 421.0) 0.02 LandPlants
Gb_41667 No alias component PsbD/D2 of PS-II reaction center complex.... 0.12 LandPlants
Smo137879 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.12 LandPlants
Solyc05g021190.2.1 No alias Photosystem II D2 protein OS=Pleurastrum terricola... 0.03 LandPlants
Zm00001e015953_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.1 LandPlants
Zm00001e042043_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 LandPlants
Zm00001e042109_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 LandPlants
Zm00001e042158_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 LandPlants
Zm00001e042173_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.09 LandPlants
Zm00001e042427_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.1 LandPlants
AMTR_s00102p00106890 evm_27.TU.AmTr_v1... Photosystem II D2 protein OS=Amborella trichopoda 0.06 SeedPlants
ATCG00270 PSBD photosystem II reaction center protein D 0.08 SeedPlants
GSVIVT01010924001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.05 SeedPlants
GSVIVT01029661001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.05 SeedPlants
Gb_06825 No alias no description available(sp|q85ac9|psbd_antag : 421.0) 0.02 SeedPlants
Gb_41667 No alias component PsbD/D2 of PS-II reaction center complex.... 0.12 SeedPlants
Solyc05g021190.2.1 No alias Photosystem II D2 protein OS=Pleurastrum terricola... 0.03 SeedPlants
Zm00001e015953_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.12 SeedPlants
Zm00001e042043_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.11 SeedPlants
Zm00001e042109_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.11 SeedPlants
Zm00001e042158_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.11 SeedPlants
Zm00001e042173_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.11 SeedPlants
Zm00001e042427_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.12 SeedPlants

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 29 318
No external refs found!