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  5. LOC_Os07g11900.1

LOC_Os07g11900.1 (LOC_Os07g11900)


Aliases : LOC_Os07g11900

Description : Prolamin PPROL 14P OS=Oryza sativa subsp. japonica (sp|q42465|pro20_orysj : 136.0)


Gene families : OG0010068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g11900.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g26690.1 LOC_Os05g26690 Prolamin PPROL 14E OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
LOC_Os12g17010.1 LOC_Os12g17010 Prolamin PPROL 17D OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 30 98
No external refs found!