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  5. LOC_Os07g10420.1

LOC_Os07g10420.1 (LOC_Os07g10420)


Aliases : LOC_Os07g10420

Description : no hits & (original description: none)


Gene families : OG0012199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g10420.1

Target Alias Description ECC score Gene Family Method Actions
AT3G03870 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT5G18130 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 OrthoFinder output from all 47 species
MA_48873g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g44395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g078590.2.1 Solyc10g078590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g080670.2.1 Solyc10g080670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033073_P001 Zm00001e033073 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!