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  5. LOC_Os07g09510.1

LOC_Os07g09510.1 (ELF5, LOC_Os07g09510)


Aliases : ELF5, LOC_Os07g09510

Description : no description available(sp|g3chk5|elf5_pontr : 137.0)


Gene families : OG0004813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g09510.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cba_g05240 ELF5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G094100.1 ELF5, Ceric.11G094100 not classified & original description: pacid=50595118... 0.05 OrthoFinder output from all 47 species
Cre07.g348700 ELF5 No description available 0.04 OrthoFinder output from all 47 species
MA_219167g0010 ELF5 no description available(sp|q9lv14|elf5_arath : 92.8) 0.03 OrthoFinder output from all 47 species
Mp2g02580.1 ELF5 no description available(sp|g3chk5|elf5_pontr : 159.0) 0.02 OrthoFinder output from all 47 species
Ore_g00107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16982 ELF5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44636 ELF5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022135 ELF5 not classified & original description: CDS=94-1647 0.02 OrthoFinder output from all 47 species
Smo407204 ELF5 No description available 0.02 OrthoFinder output from all 47 species
Zm00001e011413_P004 ELF5, Zm00001e011413 no description available(sp|g3chk5|elf5_Pontr : 161.0) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR019007 WW_dom-bd_prot_11 49 104
No external refs found!