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  5. LOC_Os07g09470.1

LOC_Os07g09470.1 (LOC_Os07g09470)


Aliases : LOC_Os07g09470

Description : AAA-ATPase At3g28610 OS=Arabidopsis thaliana (sp|q9ljj5|aatpb_arath : 398.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g09470.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00215810 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00216540 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT3G50930 BCS1 cytochrome BC1 synthesis 0.01 OrthoFinder output from all 47 species
AT4G25835 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G17730 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT5G40010 AATP1 AAA-ATPase 1 0.02 OrthoFinder output from all 47 species
Adi_g054957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05390 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g07534 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Aev_g17775 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g04656 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g15220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17638 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g32826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06417.t1 Aspi01Gene06417 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene12634.t1 Aspi01Gene12634 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12635.t1 Aspi01Gene12635 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G064600.1 Ceric.07G064600 not classified & original description: pacid=50626260... 0.09 OrthoFinder output from all 47 species
Ceric.19G071400.1 Ceric.19G071400 not classified & original description: pacid=50575223... 0.03 OrthoFinder output from all 47 species
Ceric.19G071600.1 Ceric.19G071600 not classified & original description: pacid=50575855... 0.03 OrthoFinder output from all 47 species
Ceric.19G071900.1 Ceric.19G071900 not classified & original description: pacid=50575289... 0.01 OrthoFinder output from all 47 species
Ceric.37G021100.1 Ceric.37G021100 not classified & original description: pacid=50616007... 0.03 OrthoFinder output from all 47 species
Ceric.37G021200.1 Ceric.37G021200 not classified & original description: pacid=50616287... 0.06 OrthoFinder output from all 47 species
Dac_g32226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12773 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g52355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01010371001 BCS1 AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os03g58800.1 AATP1, LOC_Os03g58800 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g22700.1 LOC_Os10g22700 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g28137.1 AATP1, LOC_Os12g28137 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28177.1 AATP1, LOC_Os12g28177 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g44210.1 AATP1, LOC_Os12g44210 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10067279g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10430798g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_28097g0010 BCS1 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_296237g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_604139g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g10169 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08375 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g42642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo407065 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo419965 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g082640.3.1 Solyc03g082640 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g54056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004348_P001 Zm00001e004348 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e013139_P001 Zm00001e013139 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020637_P001 BCS1, Zm00001e020637 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 52 153
IPR003959 ATPase_AAA_core 277 414
No external refs found!