1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g04910.1

LOC_Os07g04910.1 (LOC_Os07g04910)


Aliases : LOC_Os07g04910

Description : ER-associated protein (Reticulon)


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g04910.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g007522 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Adi_g015887 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Adi_g021347 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Als_g43655 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Aop_g13484 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.10G041900.1 Ceric.10G041900 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.21G003500.1 Ceric.21G003500 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cre06.g308950 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g27211 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Msp_g26217 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Pir_g12014 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005785 BTI1, RTNLB1 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Tin_g30113 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Zm00001e014238_P002 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.05 OrthoFinder output from all 47 species
Zm00001e038234_P001 Zm00001e038234 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 61 214
No external refs found!