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  5. LOC_Os07g03279.1

LOC_Os07g03279.1 (LOC_Os07g03279)


Aliases : LOC_Os07g03279

Description : Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum (sp|p11670|prb1_tobac : 141.0)


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g03279.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00199860 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00174680 evm_27.TU.AmTr_v1... STS14 protein OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
AT1G50050 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.05 OrthoFinder output from all 47 species
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 OrthoFinder output from all 47 species
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT4G33720 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.07 OrthoFinder output from all 47 species
AT5G26130 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
Als_g04794 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13400 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35776 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14794.t1 Aspi01Gene14794 CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71537.t1 Aspi01Gene71537 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05029 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06229 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13654 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33701 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08251 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22307 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.07 OrthoFinder output from all 47 species
GSVIVT01038540001 PRB1, ATPRB1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.02 OrthoFinder output from all 47 species
Gb_11042 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
Gb_11050 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_11051 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_16215 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os01g28500.1 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.08 OrthoFinder output from all 47 species
LOC_Os02g27300.1 LOC_Os02g27300 Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54540.1 LOC_Os02g54540 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.08 OrthoFinder output from all 47 species
LOC_Os02g54560.1 LOC_Os02g54560 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03620.1 ATPR1, PR1, PR... Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os07g03680.1 LOC_Os07g03680 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
MA_10314549g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_2097164g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Mp3g14110.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp3g14130.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Mp5g12510.1 PRB1, ATPRB1 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Mp5g12540.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Msp_g00306 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34790 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36477 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38833 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c25_120V3.1 Pp3c25_120 CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.01 OrthoFinder output from all 47 species
Ppi_g19923 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.04 OrthoFinder output from all 47 species
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.03 OrthoFinder output from all 47 species
Solyc08g068990.2.1 Solyc08g068990 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.1 OrthoFinder output from all 47 species
Zm00001e005581_P001 Zm00001e005581 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 129.0) 0.02 OrthoFinder output from all 47 species
Zm00001e011196_P001 Zm00001e011196 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.07 OrthoFinder output from all 47 species
Zm00001e016075_P001 Zm00001e016075 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.1 OrthoFinder output from all 47 species
Zm00001e032757_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e033272_P001 Zm00001e033272 Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 36 159
No external refs found!