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  5. LOC_Os07g03070.1

LOC_Os07g03070.1 (LOC_Os07g03070)


Aliases : LOC_Os07g03070

Description : histone chaperone (NASP)


Gene families : OG0003988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g03070.1

Target Alias Description ECC score Gene Family Method Actions
AT4G37210 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g35882 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g280800 No alias Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Dac_g16070 No alias histone chaperone *(NASP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003774001 No alias Chromatin organisation.histone chaperone... 0.04 OrthoFinder output from all 47 species
Len_g16954 No alias histone chaperone *(NASP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28472 No alias histone chaperone *(NASP) & original description: none 0.05 OrthoFinder output from all 47 species
MA_102821g0020 No alias histone chaperone (NASP) 0.04 OrthoFinder output from all 47 species
Msp_g09754 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28055 No alias histone chaperone *(NASP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011547_P002 Zm00001e011547 histone chaperone (NASP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!