1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g02300.1

LOC_Os07g02300.1 (SRFR1, LOC_Os07g02300)


Aliases : SRFR1, LOC_Os07g02300

Description : Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana (sp|f4js25|srfr1_arath : 953.0)


Gene families : OG0006004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006004_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g02300.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272300 SRFR1,... Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G37460 SRFR1 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01000163001 SRFR1 Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g03381 SRFR1 regulatory protein *(SRFR) of TNL-mediated... 0.02 OrthoFinder output from all 47 species
Zm00001e011573_P001 SRFR1, Zm00001e011573 Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 503 532
No external refs found!