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  5. LOC_Os07g01260.1

LOC_Os07g01260.1 (LOC_Os07g01260)


Aliases : LOC_Os07g01260

Description : La-related protein 6C OS=Arabidopsis thaliana (sp|q9lhl3|lrp6c_arath : 240.0)


Gene families : OG0002191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g01260.1

Target Alias Description ECC score Gene Family Method Actions
AT3G19090 No alias RNA-binding protein 0.04 OrthoFinder output from all 47 species
Als_g39209 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Als_g55309 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Aob_g07907 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031802001 No alias La-related protein 6C OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc01g108310.4.1 Solyc01g108310 La-related protein 6C OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc08g015650.3.1 Solyc08g015650 La-related protein 6B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g050550.3.1 Solyc10g050550 La-related protein 6C OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc12g096640.3.1 Solyc12g096640 La-related protein 6B OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e032645_P001 Zm00001e032645 La-related protein 6C OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 212 281
IPR006630 La_HTH 119 176
No external refs found!