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  5. LOC_Os07g01020.1

LOC_Os07g01020.1 (ATPDX1.3, RSR4,...)


Aliases : ATPDX1.3, RSR4, ATPDX1, PDX1.3, PDX1, LOC_Os07g01020

Description : synthase component of pyridoxal 5-phosphate synthase complex


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g01020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00021030 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.03 OrthoFinder output from all 47 species
AT5G01410 ATPDX1.3, RSR4,... Aldolase-type TIM barrel family protein 0.03 OrthoFinder output from all 47 species
Aev_g24421 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Ala_g13022 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05123.t1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012025 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.47 ATPDX1.3, RSR4,... Coenzyme metabolism.pyridoxalphosphate... 0.02 OrthoFinder output from all 47 species
Dac_g09304 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Dcu_g02513 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Dcu_g04530 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Dde_g52271 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Gb_23607 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os11g48080.1 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase complex 0.04 OrthoFinder output from all 47 species
Nbi_g27713 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Ore_g31171 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Pir_g03349 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Sam_g28771 No alias synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Sam_g51006 No alias synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 32 237
No external refs found!