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  5. LOC_Os06g50840.1

LOC_Os06g50840.1 (LOC_Os06g50840)


Aliases : LOC_Os06g50840

Description : FREE1 associated protein of ESCRT-III complex


Gene families : OG0003642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g50840.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT1G20110 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g106375 No alias associated protein of ESCRT-III complex *(FREE1) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0233.g059406 No alias associated protein of ESCRT-III complex *(FREE1) &... 0.04 OrthoFinder output from all 47 species
Ceric.10G054900.1 Ceric.10G054900 associated protein of ESCRT-III complex *(FREE1) &... 0.02 OrthoFinder output from all 47 species
Dcu_g08914 No alias associated protein of ESCRT-III complex *(FREE1) &... 0.03 OrthoFinder output from all 47 species
Mp6g06950.1 No alias FREE1 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Msp_g08867 No alias associated protein of ESCRT-III complex *(FREE1) &... 0.04 OrthoFinder output from all 47 species
Zm00001e013299_P001 Zm00001e013299 FREE1 associated protein of ESCRT-III complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 336 400
No external refs found!