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  5. LOC_Os06g50180.1

LOC_Os06g50180.1 (LOC_Os06g50180)


Aliases : LOC_Os06g50180

Description : Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana (sp|q8gwx2|nipa6_arath : 357.0)


Gene families : OG0000631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g50180.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00190400 evm_27.TU.AmTr_v1... Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g033110 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088182 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13075 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37096 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G030800.1 Ceric.15G030800 solute transporter *(NIPA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G053700.1 Ceric.23G053700 solute transporter *(NIPA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.38G016500.1 Ceric.38G016500 solute transporter *(NIPA) & original description:... 0.05 OrthoFinder output from all 47 species
Cre12.g546350 No alias Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g05684 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11264 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08171 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24269 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02312 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10923 No alias solute transporter *(NIPA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_381200g0010 No alias Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pir_g11225 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08833 No alias solute transporter *(NIPA) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15430 No alias solute transporter *(NIPA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009357 No alias solute transporter *(NIPA) & original description: CDS=146-1123 0.03 OrthoFinder output from all 47 species
Solyc09g092220.3.1 Solyc09g092220 Probable magnesium transporter NIPA2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g098450.2.1 Solyc12g098450 Probable magnesium transporter NIPA2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e019060_P002 Zm00001e019060 Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e021361_P002 Zm00001e021361 Probable magnesium transporter NIPA4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e027000_P001 Zm00001e027000 Probable magnesium transporter NIPA7 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015095 magnesium ion transmembrane transporter activity IEA Interproscan
BP GO:0015693 magnesium ion transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR008521 Mg_trans_NIPA 5 296
No external refs found!