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  5. LOC_Os06g50000.1

LOC_Os06g50000.1 (AtCIB22, CIB22, LOC_Os06g50000)


Aliases : AtCIB22, CIB22, LOC_Os06g50000

Description : component NDUFB9 of NADH dehydrogenase beta subcomplex


Gene families : OG0004164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g50000.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT4G34700 AtCIB22, CIB22 LYR family of Fe/S cluster biogenesis protein 0.09 OrthoFinder output from all 47 species
Adi_g075546 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Aev_g00507 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Als_g24201 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Aob_g04789 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Aop_g30939 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008770 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.06 OrthoFinder output from all 47 species
Cba_g69083 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Ceric.12G082400.1 AtCIB22, CIB22,... component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.22 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.04 OrthoFinder output from all 47 species
Cre11.g467668 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.13 OrthoFinder output from all 47 species
Dac_g15010 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Dcu_g05062 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.05 OrthoFinder output from all 47 species
Dde_g02481 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Ehy_g04106 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.05 OrthoFinder output from all 47 species
GSVIVT01024171001 AtCIB22, CIB22 Cellular respiration.oxidative phosphorylation.NADH... 0.11 OrthoFinder output from all 47 species
MA_72689g0010 AtCIB22, CIB22 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g26810.1 AtCIB22, CIB22 component NDUFB9 of NADH dehydrogenase beta subcomplex 0.17 OrthoFinder output from all 47 species
Msp_g00097 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Nbi_g42131 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Pir_g02118 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Sam_g18251 No alias component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.06 OrthoFinder output from all 47 species
Solyc01g110390.2.1 AtCIB22, CIB22,... component NDUFB9 of NADH dehydrogenase beta subcomplex 0.11 OrthoFinder output from all 47 species
Spa_g15117 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Spa_g15118 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.04 OrthoFinder output from all 47 species
Tin_g12570 AtCIB22, CIB22 component *(NDUFB9/B22) of NADH dehydrogenase beta... 0.03 OrthoFinder output from all 47 species
Zm00001e013269_P002 AtCIB22, CIB22,... component NDUFB9 of NADH dehydrogenase beta subcomplex 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR008011 Complex1_LYR_dom 17 71
No external refs found!