LOC_Os06g49505.1 (LOC_Os06g49505)

Aliases : LOC_Os06g49505

Description : arogenate dehydrogenase (ADH)

Gene families : OG0002268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002268_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g49505.1
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
Aev_g10269	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g32025	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g23799	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g32444	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g39784	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08565	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g07384	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01032734001	No alias	Amino acid metabolism.biosynthesis.shikimate...	0.03	OrthoFinder output from all 47 species
Gb_28490	No alias	arogenate dehydrogenase (ADH)	0.03	OrthoFinder output from all 47 species
Gb_28491	No alias	arogenate dehydrogenase (ADH)	0.02	OrthoFinder output from all 47 species
Gb_28492	No alias	arogenate dehydrogenase (ADH)	0.03	OrthoFinder output from all 47 species
Gb_38183	No alias	arogenate dehydrogenase (ADH)	0.05	OrthoFinder output from all 47 species
LOC_Os06g49520.1	LOC_Os06g49520	arogenate dehydrogenase (ADH)	0.03	OrthoFinder output from all 47 species
Len_g51036	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g050630.3.1	Solyc06g050630	arogenate dehydrogenase (ADH)	0.03	OrthoFinder output from all 47 species
Spa_g52051	No alias	arogenate dehydrogenase *(ADH) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e013234_P001	Zm00001e013234	arogenate dehydrogenase (ADH)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004665	prephenate dehydrogenase (NADP+) activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006570	tyrosine metabolic process	None	Extended
BP	GO:0006571	tyrosine biosynthetic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
MF	GO:0008977	prephenate dehydrogenase (NAD+) activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	None	Extended
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035434	copper ion transmembrane transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003099	Prephen_DH	92	333

External Links

No external refs found!

LOC_Os06g49505.1 (LOC_Os06g49505)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation