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  5. LOC_Os06g49460.1

LOC_Os06g49460.1 (ATRER1A, LOC_Os06g49460)


Aliases : ATRER1A, LOC_Os06g49460

Description : Protein RER1A OS=Arabidopsis thaliana (sp|o48670|rer1a_arath : 204.0)


Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g49460.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Adi_g104878 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Als_g08194 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.65 ATRER1C1 Protein RER1C OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g04303 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g15513 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e013219_P001 ATRER1A, Zm00001e013219 Protein RER1A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e017155_P001 ATRER1A, Zm00001e017155 Protein RER1A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e025626_P001 ATRER1A, Zm00001e025626 Protein RER1A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR004932 Rer1 18 181
No external refs found!