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  5. LOC_Os06g49050.1

LOC_Os06g49050.1 (LOC_Os06g49050)


Aliases : LOC_Os06g49050

Description : no hits & (original description: none)


Gene families : OG0000018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g49050.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT3G13010 No alias hAT transposon superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15020 No alias hAT transposon superfamily 0.03 OrthoFinder output from all 47 species
Adi_g049417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08843.t1 Aspi01Gene08843 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21974.t1 Aspi01Gene21974 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G020000.1 Ceric.02G020000 not classified & original description: pacid=50584675... 0.02 OrthoFinder output from all 47 species
Dde_g52548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13274 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g19673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g007470.2.1 Solyc08g007470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g25447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007021 DUF659 186 331
No external refs found!