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  5. LOC_Os06g48065.1

LOC_Os06g48065.1 (ATL43, LOC_Os06g48065)


Aliases : ATL43, LOC_Os06g48065

Description : RING-H2-class E3 ligase


Gene families : OG0002999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g48065.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00242060 ATL43,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g26807 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.02G098900.1 Ceric.02G098900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g11346 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g10160 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
LOC_Os05g51780.1 LOC_Os05g51780 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Ppi_g30667 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc12g007320.1.1 Solyc12g007320 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Tin_g28001 ATL43 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e013130_P001 ATL43, Zm00001e013130 RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 116 159
No external refs found!