LOC_Os06g47320.1 (LOC_Os06g47320)

Aliases : LOC_Os06g47320

Description : CCT7 subunit eta of CCT chaperonin folding complex

Gene families : OG0006075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g47320.1

Target	Alias	Description	ECC score	Gene Family Method
Cba_g11704	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001371.8	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
Cre01.g026550	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
Dcu_g14177	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Mp7g09680.1	No alias	CCT7 subunit eta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Msp_g08578	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.06	OrthoFinder output from all 47 species
Nbi_g00986	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.02	OrthoFinder output from all 47 species
Solyc06g065520.3.1	Solyc06g065520	CCT7 subunit eta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Spa_g06049	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	35	526

External Links

No external refs found!