1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g47130.1

LOC_Os06g47130.1 (NTMC2T1.3, SYT3,...)


Aliases : NTMC2T1.3, SYT3, NTMC2TYPE1.3, ATSYTC, SYTC, LOC_Os06g47130

Description : endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g47130.1

Target Alias Description ECC score Gene Family Method Actions
AT2G21040 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
Adi_g012486 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Aev_g13154 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17425 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06280 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Aob_g19319 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11488 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12444 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07575.t1 Aspi01Gene07575 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10591 NTMC2TYPE1.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16169 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Cba_g32210 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ceric.07G078600.1 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Dac_g16761 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10269 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Dde_g07532 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10686 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13072 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17237 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01025699001 NTMC2T1.3, SYT3,... Synaptotagmin-3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_35153 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g30929 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g04720.1 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g02059 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Msp_g02454 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06946 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17004 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10258 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18513 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00987 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ppi_g02231 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60838 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19845 No alias membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Solyc08g021940.3.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g05441 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02695 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010861_P001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013057_P001 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 66 247
IPR000008 C2_dom 421 523
IPR000008 C2_dom 260 352
No external refs found!