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  5. LOC_Os06g46770.2

LOC_Os06g46770.2 (UBQ10, LOC_Os06g46770)


Aliases : UBQ10, LOC_Os06g46770

Description : ubiquitin-fold protein (UBQ)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46770.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g068276 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.08 OrthoFinder output from all 47 species
Als_g60566 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11689 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08297 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27260.t1 UBQ10, Aspi01Gene27260 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044095 No alias not classified & original description: CDS=173-409 0.04 OrthoFinder output from all 47 species
Cba_g77311 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021318.73 UBQ10 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g45001 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48343 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.07 OrthoFinder output from all 47 species
Len_g36572 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_1213520g0010 UBQ11 Polyubiquitin 9 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_89348g0010 UBQ14 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
Mp6g03960.1 UBQ4 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp7g14690.1 UBQ6 component RPS27a of SSU proteome 0.06 OrthoFinder output from all 47 species
Ore_g34037 UBQ12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_2510V3.1 UBQ14, Pp3c18_2510 ubiquitin 4 0.02 OrthoFinder output from all 47 species
Pp3c19_8830V3.1 UBQ10, Pp3c19_8830 polyubiquitin 10 0.03 OrthoFinder output from all 47 species
Pp3c3_26770V3.1 UBQ11, Pp3c3_26770 polyubiquitin 10 0.03 OrthoFinder output from all 47 species
Sam_g05951 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Tin_g40776 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010317_P001 Zm00001e010317 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035030_P001 Zm00001e035030 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 459 530
IPR000626 Ubiquitin-like_dom 307 378
IPR000626 Ubiquitin-like_dom 231 302
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 383 454
IPR000626 Ubiquitin-like_dom 155 226
No external refs found!