1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g46500.1

LOC_Os06g46500.1 (sks4, LOC_Os06g46500)


Aliases : sks4, LOC_Os06g46500

Description : L-ascorbate oxidase homolog OS=Brassica napus (sp|q00624|asol_brana : 540.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor(50.1.10 : 127.0)


Gene families : OG0000411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00062610 SKU5,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00093220 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
AMTR_s00159p00040990 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
AMTR_s00163p00059030 sks3,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
AT1G75790 sks18 SKU5 similar 18 0.03 OrthoFinder output from all 47 species
AT2G23630 sks16 SKU5 similar 16 0.06 OrthoFinder output from all 47 species
AT4G37160 sks15 SKU5 similar 15 0.06 OrthoFinder output from all 47 species
AT5G66920 sks17 SKU5 similar 17 0.03 OrthoFinder output from all 47 species
Adi_g010803 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Adi_g086902 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Aev_g29914 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ala_g14999 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ala_g31950 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Als_g09372 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Als_g32346 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Als_g48778 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Aob_g23629 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aop_g08919 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aop_g09788 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05882.t1 sks4, Aspi01Gene05882 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55393.t1 sks4, Aspi01Gene55393 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Cba_g12747 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ceric.02G005000.1 sks5, Ceric.02G005000 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.02G005300.1 sks5, Ceric.02G005300 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.1Z016700.1 sks4, Ceric.1Z016700 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dac_g37603 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Dcu_g10705 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g13483 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g26392 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g46094 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Dde_g07912 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ehy_g06013 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ehy_g06856 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ehy_g14634 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ehy_g30073 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
GSVIVT01018624001 SKU5 Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_17061 sks5 L-ascorbate oxidase homolog OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
Gb_32353 SKS6 L-ascorbate oxidase homolog OS=Brassica napus... 0.01 OrthoFinder output from all 47 species
Len_g45890 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Lfl_g22071 sks17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Nbi_g06735 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Nbi_g08019 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ore_g29990 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ore_g37964 SKS6 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Pir_g24049 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Pnu_g21610 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ppi_g05827 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g13020 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g33219 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g56836 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g63350 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Sam_g17165 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Smo403803 sks5 L-ascorbate oxidase homolog OS=Brassica napus 0.02 OrthoFinder output from all 47 species
Solyc02g065170.3.1 sks17, Solyc02g065170 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc02g090360.3.1 sks17, Solyc02g090360 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Solyc04g081520.3.1 sks18, Solyc04g081520 Monocopper oxidase-like protein SKS1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g082140.3.1 sks5, Solyc04g082140 L-ascorbate oxidase homolog OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
Solyc07g052230.3.1 sks5, Solyc07g052230 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc08g079090.4.1 SKU5, Solyc08g079090 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g40812 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Spa_g50715 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Tin_g36245 sks4 EC_1.10 oxidoreductase acTing on diphenol or related... 0.02 OrthoFinder output from all 47 species
Zm00001e004398_P001 SKU5, Zm00001e004398 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e040242_P006 SKU5, Zm00001e040242 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_N 36 146
IPR011706 Cu-oxidase_C 405 513
IPR001117 Cu-oxidase_2nd 159 295
No external refs found!