1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g46436.1

LOC_Os06g46436.1 (LOC_Os06g46436)


Aliases : LOC_Os06g46436

Description : component PsaC of PS-I complex


Gene families : OG0010193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010193_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46436.1

Target Alias Description ECC score Gene Family Method Actions
ATCG01060 PSAC iron-sulfur cluster binding;electron carriers;4 iron, 4... 0.41 OrthoFinder output from all 47 species
Ceric.05G044000.1 PSAC, Ceric.05G044000 component *(PsaC) of PS-I complex & original... 0.1 OrthoFinder output from all 47 species
Ceric.05G045300.1 PSAC, Ceric.05G045300 component *(PsaC) of PS-I complex & original... 0.1 OrthoFinder output from all 47 species
Ceric.16G017800.1 PSAC, Ceric.16G017800 component *(PsaC) of PS-I complex & original... 0.11 OrthoFinder output from all 47 species
Ceric.18G053500.1 PSAC, Ceric.18G053500 component *(PsaC) of PS-I complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.25G036000.1 PSAC, Ceric.25G036000 component *(PsaC) of PS-I complex & original... 0.24 OrthoFinder output from all 47 species
Ceric.35G068500.1 PSAC, Ceric.35G068500 component *(PsaC) of PS-I complex & original... 0.11 OrthoFinder output from all 47 species
GSVIVT01034636001 PSAC Photosystem I iron-sulfur center OS=Nicotiana tabacum 0.11 OrthoFinder output from all 47 species
Smo137785 PSAC Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.03 OrthoFinder output from all 47 species
Solyc02g011760.1.1 PSAC, Solyc02g011760 Photosystem I iron-sulfur center OS=Cucumis sativus... 0.3 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!