LOC_Os06g46310.2 (PMIT1, NRAMP1,...)

Aliases : PMIT1, NRAMP1, ATNRAMP1, LOC_Os06g46310

Description : metal cation transporter (NRAMP)

Gene families : OG0000603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000603_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g46310.2

Target	Alias	Description	ECC score	Gene Family Method
AT5G67330	ATNRAMP4, NRAMP4	natural resistance associated macrophage protein 4	0.05	OrthoFinder output from all 47 species
Mp4g10130.1	NRAMP6, ATNRAMP6	metal cation transporter (NRAMP)	0.02	OrthoFinder output from all 47 species
Nbi_g04230	PMIT1, NRAMP1, ATNRAMP1	metal cation transporter *(NRAMP) & original description: none	0.09	OrthoFinder output from all 47 species
Pir_g10287	ATNRAMP4, NRAMP4	metal cation transporter *(NRAMP) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g092800.3.1	ATNRAMP3,...	metal cation transporter (NRAMP)	0.06	OrthoFinder output from all 47 species
Zm00001e038756_P001	ATNRAMP2,...	metal cation transporter (NRAMP)	0.17	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001046	NRAMP_fam	70	433

External Links

No external refs found!