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  5. LOC_Os06g45510.1

LOC_Os06g45510.1 (TH7, ATH7, LOC_Os06g45510)


Aliases : TH7, ATH7, LOC_Os06g45510

Description : O-type thioredoxin


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g45510.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00246800 ATTRX1, ATTRX... Protein modification.S-nitrosylation and... 0.04 OrthoFinder output from all 47 species
AMTR_s00032p00240160 TO1, ATO1,... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.03 OrthoFinder output from all 47 species
Adi_g030104 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074847 ATO2, TO2 O-type thioredoxin *(Trx-O) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20534 TRXH2, TRX2,... O-type thioredoxin *(Trx-O) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43276 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08446 TO1, ATO1 O-type thioredoxin *(Trx-O) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001041.23 ATTRX1, ATTRX H1, TRX1 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder output from all 47 species
Cre09.g391900 ATTRX4, ATH4 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.03 OrthoFinder output from all 47 species
Dac_g00288 TO1, ATO1 O-type thioredoxin *(Trx-O) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51066 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24299 ATH9, TH9, TRX H9 H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Nbi_g13627 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14812 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g015820.3.1 ATH9, TH9, TRX... H-type thioredoxin 0.04 OrthoFinder output from all 47 species
Spa_g10485 ATO2, TO2 O-type thioredoxin *(Trx-O) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02298 ATO2, TO2 O-type thioredoxin *(Trx-O) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037744_P001 TH7, ATH7, Zm00001e037744 O-type thioredoxin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036265 RNA (guanine-N7)-methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0070476 rRNA (guanine-N7)-methylation IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 69 168
No external refs found!