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  5. LOC_Os06g45460.1

LOC_Os06g45460.1 (UFO, LOC_Os06g45460)


Aliases : UFO, LOC_Os06g45460

Description : component UFO of SCF E3 ubiquitin ligase complex


Gene families : OG0002287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g45460.1

Target Alias Description ECC score Gene Family Method Actions
AT1G30950 UFO F-box family protein 0.06 OrthoFinder output from all 47 species
Msp_g11165 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024094 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc02g081670.1.1 UFO, Solyc02g081670 component UFO of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Zm00001e037737_P001 UFO, Zm00001e037737 component UFO of SCF E3 ubiquitin ligase complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!