LOC_Os08g38440 (Os08g0492400)


Aliases : Os08g0492400

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2 calcium/lipid-binding and GRAM domain containing protein


Gene families : OG_01_0001482 (Gene family) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g38440
Cluster HCCA cluster: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT1G03370 No alias C2 calcium/lipid-binding and GRAM domain containing protein 0.03 Gene family
LOC_Os02g10630 Os02g0199800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.04 Gene family
LOC_Os06g19400 Os06g0297800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.04 Gene family
LOC_Os06g40570 Os06g0607900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.03 Gene family
Smo118690 PACid_15410242 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.05 Gene family
Solyc03g112280.3.1 Solyc03g112280.3 35.1.19 not assigned.no ontology.C2 domain-containing... 0.01 Gene family
Solyc04g015160.3.1 Solyc04g015160.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.03 Gene family
Zm00001d031289 GRMZM2G179351 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.02 Gene family
Zm00001d045800 GRMZM2G027665 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING C2... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004182 GRAM 621 683
IPR031968 VASt 185 333
IPR031968 VASt 788 929
IPR000008 C2_dom 467 568
No external refs found!