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  5. LOC_Os06g43910.1

LOC_Os06g43910.1 (RR18, ARR18, LOC_Os06g43910)


Aliases : RR18, ARR18, LOC_Os06g43910

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g43910.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G67710 ARR11 response regulator 11 0.04 OrthoFinder output from all 47 species
Adi_g011347 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12211 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08389 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10873 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13806 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G029800.1 ARR11, Ceric.16G029800 subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.17G049600.1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Dcu_g47938 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04944 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13817 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
GSVIVT01010626001 ARR10, RR10 RNA biosynthesis.transcriptional activation.ARR-B... 0.13 OrthoFinder output from all 47 species
Len_g49270 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Len_g56038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57707 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35598 ARR1, RR1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20141 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g27542 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05219 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05741 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Solyc05g014260.3.1 ARR11, Solyc05g014260 B-type cytokinin ARR response activator. transcription... 0.05 OrthoFinder output from all 47 species
Solyc12g099380.3.1 ARR1, RR1, Solyc12g099380 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g22892 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Spa_g37790 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Spa_g46548 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 188 238
IPR001789 Sig_transdc_resp-reg_receiver 18 126
No external refs found!