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  5. LOC_Os06g42000.1

LOC_Os06g42000.1 (LOC_Os06g42000)


Aliases : LOC_Os06g42000

Description : type-2 peroxiredoxin (PrxII)


Gene families : OG0001036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g42000.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Adi_g007694 No alias type-2 peroxiredoxin *(PrxII) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42240 TPX1 type-2 peroxiredoxin *(PrxII) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46778 TPX1 type-2 peroxiredoxin *(PrxII) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10405 TPX1 type-2 peroxiredoxin *(PrxII) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G009000.1 Ceric.39G009000 type-2 peroxiredoxin *(PrxII) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g37870 TPX1 type-2 peroxiredoxin *(PrxII) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10654 No alias type-2 peroxiredoxin *(PrxII) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36270 TPX1 type-2 peroxiredoxin *(PrxII) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47195 TPX1 type-2 peroxiredoxin *(PrxII) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005025 No alias type-2 peroxiredoxin *(PrxII) & original description: CDS=1-708 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR013740 Redoxin 73 229
No external refs found!