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  5. LOC_Os06g41480.1

LOC_Os06g41480.1 (LOC_Os06g41480)


Aliases : LOC_Os06g41480

Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 318.0)


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41480.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
GSVIVT01000642001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01000666001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 OrthoFinder output from all 47 species
GSVIVT01000668001 No alias Disease resistance protein RGA2 OS=Solanum bulbocastanum 0.03 OrthoFinder output from all 47 species
GSVIVT01001469001 No alias Disease resistance protein RGA2 OS=Solanum bulbocastanum 0.05 OrthoFinder output from all 47 species
GSVIVT01001473001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01006243001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01012443001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01013535001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01019351001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.02 OrthoFinder output from all 47 species
GSVIVT01022832001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01023015001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01036660001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01037447001 No alias Putative disease resistance protein At3g14460... 0.06 OrthoFinder output from all 47 species
LOC_Os03g24310.1 LOC_Os03g24310 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g43340.1 LOC_Os04g43340 Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os05g34220.1 LOC_Os05g34220 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os07g17220.1 LOC_Os07g17220 Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
LOC_Os07g17250.1 LOC_Os07g17250 Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
LOC_Os08g43050.1 LOC_Os08g43050 Putative disease resistance protein RGA1 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Pir_g37047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g071430.1.1 Solyc11g071430 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e027057_P001 Zm00001e027057 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR041118 Rx_N 26 103
IPR002182 NB-ARC 208 438
No external refs found!