1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g40570.1

LOC_Os06g40570.1 (LOC_Os06g40570)


Aliases : LOC_Os06g40570

Description : C2 and GRAM domain-containing protein At1g03370 OS=Arabidopsis thaliana (sp|q9zvt9|c2gr1_arath : 711.0)


Gene families : OG0002452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g40570.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00208380 evm_27.TU.AmTr_v1... C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00181260 evm_27.TU.AmTr_v1... C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
Aop_g65715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z037100.1 Ceric.1Z037100 not classified & original description: pacid=50594738... 0.02 OrthoFinder output from all 47 species
Dcu_g23957 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01007656001 No alias C2 and GRAM domain-containing protein At5g50170... 0.02 OrthoFinder output from all 47 species
LOC_Os08g38440.1 LOC_Os08g38440 C2 and GRAM domain-containing protein At1g03370... 0.05 OrthoFinder output from all 47 species
Len_g08450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0094.g019154 No alias not classified & original description: CDS=1-3057 0.04 OrthoFinder output from all 47 species
Solyc04g015160.3.1 Solyc04g015160 C2 and GRAM domain-containing protein At1g03370... 0.02 OrthoFinder output from all 47 species
Zm00001e003425_P003 Zm00001e003425 C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
Zm00001e036865_P001 Zm00001e036865 C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
Zm00001e037435_P001 Zm00001e037435 C2 and GRAM domain-containing protein At1g03370... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR031968 VASt 822 964
IPR031968 VASt 301 449
IPR000008 C2_dom 2 103
No external refs found!