LOC_Os06g40200.2 (LOC_Os06g40200)

Aliases : LOC_Os06g40200

Description : solute transporter (MTCC)

Gene families : OG0003228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003228_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g40200.2

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00016p00237360	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.MC-type...	0.03	OrthoFinder output from all 47 species
Smo118883	No alias	Solute transport.carrier-mediated transport.MC-type...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	131	189
IPR002048	EF_hand_dom	63	125
IPR018108	Mitochondrial_sb/sol_carrier	229	317
IPR018108	Mitochondrial_sb/sol_carrier	325	413
IPR018108	Mitochondrial_sb/sol_carrier	424	512

External Links

No external refs found!