LOC_Os06g39970.1 (AtCESA1, RSW1, CESA1,...)

Aliases : AtCESA1, RSW1, CESA1, LOC_Os06g39970

Description : catalytic component CesA of cellulose synthase complex

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g39970.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00196920	CESA4, NWS2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	OrthoFinder output from all 47 species
AMTR_s00137p00043990	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
Adi_g040650	IXR1, CEV1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g044360	ATCSLD4, CSLD4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g057254	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g059427	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g080371	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g082699	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g106354	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g07048	ATCSLD3, KJK, CSLD3	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g40096	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g40157	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Als_g52907	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.01	OrthoFinder output from all 47 species
Aop_g03236	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene62557.t1	IXR1, CEV1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.05G102500.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.04	OrthoFinder output from all 47 species
Dde_g02982	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.01	OrthoFinder output from all 47 species
Dde_g11281	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g38793	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.01	OrthoFinder output from all 47 species
Ehy_g26928	CESA6, PRC1, IXR2, E112	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
GSVIVT01006764001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01027717001	ATCSLG2, CSLG2	Cellulose synthase-like protein G2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01030456001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.07	OrthoFinder output from all 47 species
GSVIVT01030461001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein B4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_02801	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Gb_30276	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Gb_39671	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
LOC_Os07g36610.1	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.04	OrthoFinder output from all 47 species
LOC_Os07g36740.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.05	OrthoFinder output from all 47 species
Lfl_g15304	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
MA_415945g0010	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase-like protein B5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_595526g0010	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Mp2g05660.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.02	OrthoFinder output from all 47 species
Mp5g24530.1	ATCSLD2, CSLD2	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Mp5g24550.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Msp_g03778	ATCSLD2, CSLD2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g40952	CESA4, NWS2, IRX5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g08644	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g35645	ATCSLE1, CSLE1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06553	CESA09, CESA9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13304	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Pnu_g15169	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19575	ATCSLD4, CSLD4	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g32258	CESA4, NWS2, IRX5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05332	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g24445	No alias	catalytic component *(CesA) of cellulose synthase...	0.01	OrthoFinder output from all 47 species
Sam_g27647	No alias	catalytic component *(CesA) of cellulose synthase...	0.01	OrthoFinder output from all 47 species
Solyc03g005450.3.1	ATCSLG2, CSLG2,...	Cellulose synthase-like protein G1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Spa_g05758	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Tin_g19507	ATCSLB03, CSLB03, ATCSLB3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g39887	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.01	OrthoFinder output from all 47 species
Tin_g40633	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e035205_P002	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	127	853

External Links

No external refs found!

LOC_Os06g39970.1 (AtCESA1, RSW1, CESA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation