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  5. LOC_Os06g39690.1

LOC_Os06g39690.1 (LOC_Os06g39690)


Aliases : LOC_Os06g39690

Description : no hits & (original description: none)


Gene families : OG0005649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g39690.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT5G20140 No alias SOUL heme-binding family protein 0.05 OrthoFinder output from all 47 species
Adi_g022351 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27280.t1 Aspi01Gene27280 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0115.g046214 No alias not classified & original description: CDS=117-1316 0.03 OrthoFinder output from all 47 species
Cba_g18528 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.37G062400.1 Ceric.37G062400 not classified & original description: pacid=50616994... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.136 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g304400 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g11488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015471001 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.04 OrthoFinder output from all 47 species
Gb_04672 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.09 OrthoFinder output from all 47 species
Len_g04218 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_85577g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp7g02650.1 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.08 OrthoFinder output from all 47 species
Nbi_g09463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438881 No alias Heme-binding-like protein At3g10130, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc12g006805.1.1 Solyc12g006805 Heme-binding-like protein At3g10130, chloroplastic... 0.13 OrthoFinder output from all 47 species
Spa_g05175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037352_P002 Zm00001e037352 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 68 177
IPR006917 SOUL_haem-bd 210 373
No external refs found!