LOC_Os08g37760 (Os08g0484200)


Aliases : Os08g0484200

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). ATL6


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g37760
Cluster HCCA cluster: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.08 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.01 Gene family
AT1G72200 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G18670 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G37580 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Gene family
AT3G62690 ATL5 AtL5 0.03 Gene family
AT4G40070 No alias RING/U-box superfamily protein 0.01 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.07 Gene family
GSVIVT01008754001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os01g60730 Os01g0822800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os02g15110 Os02g0249200 No description available 0.01 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g34400 Os06g0534900,... No description available 0.01 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.01 Gene family
LOC_Os09g37050 Os09g0542600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g39450 Os10g0540000 No description available 0.04 Gene family
MA_10244600g0010 No alias No description available 0.02 Gene family
MA_10426834g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_9521306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo137213 PACid_15418424 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.11 Gene family
Smo423895 PACid_15402451 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.03 Gene family
Solyc03g033330.3.1 Solyc03g033330.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.11 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.01 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.01 Gene family
Zm00001d029763 GRMZM2G083382 No description available 0.01 Gene family
Zm00001d034369 GRMZM2G135011 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Zm00001d036348 GRMZM2G000353 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d037192 GRMZM2G329195 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d037943 GRMZM2G340444 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d053434 GRMZM2G033855 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 144 187
No external refs found!