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  5. LOC_Os06g34360.1

LOC_Os06g34360.1 (LOC_Os06g34360)


Aliases : LOC_Os06g34360

Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g34360.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00252760 RHA3A,... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.05 OrthoFinder output from all 47 species
AMTR_s00152p00054630 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G03550 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene28289.t1 Aspi01Gene28289 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G113700.1 Ceric.01G113700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.03G066200.1 Ceric.03G066200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.07G057400.1 Ceric.07G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061400.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.33G012100.1 Ceric.33G012100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.39G005300.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g00708 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Gb_03946 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_20666 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Gb_32878 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g11490.1 LOC_Os01g11490 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os02g46600.1 LOC_Os02g46600 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os12g01750.1 LOC_Os12g01750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02176 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_10431161g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g32480 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g29641 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g32844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43947 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g46048 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017298 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sam_g06931 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g16053 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e015445_P001 BRH1, Zm00001e015445 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e019779_P001 Zm00001e019779 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 101 144
No external refs found!