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  5. LOC_Os06g32910.1

LOC_Os06g32910.1 (LOC_Os06g32910)


Aliases : LOC_Os06g32910

Description : no hits & (original description: none)


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g32910.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.03 OrthoFinder output from all 47 species
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.04 OrthoFinder output from all 47 species
Als_g10316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13596.t1 Aspi01Gene13596 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene57109.t1 Aspi01Gene57109 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39964 PCR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011690001 PCR2 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031753001 No alias Cell number regulator 1 OS=Zea mays 0.02 OrthoFinder output from all 47 species
GSVIVT01031755001 PCR2 Cell number regulator 1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
Gb_14595 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_37164 No alias Cell number regulator 2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Len_g49157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_40999g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_79837g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g22330.1 No alias Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sam_g35007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g119660.2.1 Solyc03g119660 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g009620.4.1 Solyc05g009620 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g013570.2.1 Solyc12g013570 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g037950.2.1 Solyc12g037950 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 52 114
No external refs found!