LOC_Os06g29800.1 (LOC_Os06g29800)


Aliases : LOC_Os06g29800

Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 402.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g29800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 OrthoFinder output from all 47 species
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G13270 RARE1 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05108 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16781 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15602 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67897 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14090.t1 Aspi01Gene14090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22290.t1 Aspi01Gene22290 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31466.t1 Aspi01Gene31466 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34698.t1 Aspi01Gene34698 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001369 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=172-2610 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001620 No alias not classified & original description: CDS=1-4653 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024983 No alias not classified & original description: CDS=1-3423 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036580 No alias not classified & original description: CDS=1-1665 0.03 OrthoFinder output from all 47 species
Azfi_s0179.g056242 No alias not classified & original description: CDS=1-2559 0.03 OrthoFinder output from all 47 species
Azfi_s0269.g061123 No alias ssDNA-binding protein *(OSB) & original description: CDS=107-3214 0.03 OrthoFinder output from all 47 species
Azfi_s0485.g073410 No alias not classified & original description: CDS=1-1641 0.03 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06575 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57497 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G079900.1 VAC1, ECB2,... not classified & original description: pacid=50614302... 0.02 OrthoFinder output from all 47 species
Ceric.31G066800.1 Ceric.31G066800 not classified & original description: pacid=50573808... 0.03 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.02 OrthoFinder output from all 47 species
Dac_g03824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21707 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28766 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35668 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42987 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07645 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07647 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15898 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005577001 EMB2261 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
GSVIVT01008721001 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_32452 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
Gb_36775 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09800.1 OTP82, LOC_Os02g09800 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.02 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08837 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23462 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g34141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23499 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23174 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46049 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48107 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27419 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55456 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005803 No alias not classified & original description: CDS=32-2446 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010489 No alias not classified & original description: CDS=290-3358 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012739 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013529 No alias ssDNA-binding protein *(OSB) & original description: CDS=539-3667 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014767 OTP84 not classified & original description: CDS=399-2006 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017880 No alias not classified & original description: CDS=1-1959 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018498 No alias not classified & original description: CDS=87-2291 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019259 No alias not classified & original description: CDS=1-1518 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020627 No alias not classified & original description: CDS=1-2037 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023237 No alias not classified & original description: CDS=1-2250 0.02 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Solyc05g046280.3.1 Solyc05g046280 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Solyc07g045510.4.1 Solyc07g045510 RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06875 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22900 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29860 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Zm00001e030605_P001 Zm00001e030605 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006471 obsolete protein ADP-ribosylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 549 573
IPR002885 Pentatricopeptide_repeat 69 98
IPR002885 Pentatricopeptide_repeat 278 301
IPR002885 Pentatricopeptide_repeat 40 68
IPR002885 Pentatricopeptide_repeat 373 420
IPR002885 Pentatricopeptide_repeat 476 522
No external refs found!