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  5. LOC_Os06g29310.1

LOC_Os06g29310.1 (OTS1, ULP1D, LOC_Os06g29310)


Aliases : OTS1, ULP1D, LOC_Os06g29310

Description : protease (OTS)


Gene families : OG0001045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g29310.1

Target Alias Description ECC score Gene Family Method Actions
AT1G10570 OTS2, ULP1C Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G60220 OTS1, ULP1D UB-like protease 1D 0.04 OrthoFinder output from all 47 species
Adi_g116276 OTS1, ULP1D protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14723 No alias protease *(SPF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21486 OTS2, ULP1C protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00707 No alias protease *(OTS) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13032.t1 Aspi01Gene13032 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22063 OTS1, ULP1D protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.8 OTS2, ULP1C Probable ubiquitin-like-specific protease 2A... 0.02 OrthoFinder output from all 47 species
Cre06.g278197 No alias Probable ubiquitin-like-specific protease 2B... 0.01 OrthoFinder output from all 47 species
Dcu_g01742 OTS1, ULP1D protease *(OTS) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09433 No alias protease *(SPF) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21582 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g26300.1 No alias protease (SPF). protease (OTS) 0.04 OrthoFinder output from all 47 species
Pir_g11305 OTS2, ULP1C protease *(OTS) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42300 No alias protease *(SPF) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028717_P001 Zm00001e028717 protease (SPF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 259 453
No external refs found!