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  5. LOC_Os06g24070.1

LOC_Os06g24070.1 (ATGLK1, GPRI1, GLK1,...)


Aliases : ATGLK1, GPRI1, GLK1, LOC_Os06g24070

Description : G2-like GARP transcription factor


Gene families : OG0001485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g24070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00133630 ATGLK1, GPRI1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00035260 APRR2, PRR2,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT2G20570 ATGLK1, GPRI1, GLK1 GBF's pro-rich region-interacting factor 1 0.02 OrthoFinder output from all 47 species
AT5G44190 GPRI2, ATGLK2, GLK2 GOLDEN2-like 2 0.09 OrthoFinder output from all 47 species
Adi_g009495 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g082563 GPRI2, ATGLK2, GLK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07283 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.09 OrthoFinder output from all 47 species
Aev_g19477 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g07360 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aob_g12665 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33376.t2 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene33760.t1 APRR2, PRR2,... GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33761.t1 APRR2, PRR2,... GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009757 GPRI2, ATGLK2, GLK2 not classified & original description: CDS=44-1300 0.02 OrthoFinder output from all 47 species
Cba_g05926 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G054500.1 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06445 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g16068 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.07 OrthoFinder output from all 47 species
Dcu_g18704 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020604001 ATGLK1, GPRI1, GLK1 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Len_g35828 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g36726 GPRI2, ATGLK2, GLK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04155 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g07798 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.05 OrthoFinder output from all 47 species
MA_78829g0010 ATGLK1, GPRI1, GLK1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g36232 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g01379 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g04237 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33226 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32425 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008347 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g04268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo428906 APRR2, PRR2 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
Solyc07g053630.4.1 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g11464 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016357_P002 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e036073_P002 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 183 232
No external refs found!