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Aliases : LOC_Os06g23460
Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 483.0)
Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G51580 | No alias | RNA-binding KH domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G03110 | No alias | RNA binding;nucleic acid binding | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15270 | No alias | RNA-binding KH domain-containing protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G64390 | HEN4 | RNA-binding KH domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g010429 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022420 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023126 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g028830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055224 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058992 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074054 | HEN4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075813 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085503 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g092270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117114 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g128615 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03920 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04093 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g11460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09715 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g15857 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08517 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19267 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04253 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g19887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29218 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g62599 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015733 | No alias | not classified & original description: CDS=260-2488 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057204 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0280.g062273 | No alias | not classified & original description: CDS=315-2570 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03276 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06665 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07339 | HEN4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12254 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g24288 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g71670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G007100.1 | Ceric.14G007100 | not classified & original description: pacid=50632910... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G032000.1 | Ceric.17G032000 | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G027100.1 | Ceric.25G027100 | not classified & original description: pacid=50594480... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G028300.1 | Ceric.32G028300 | not classified & original description: pacid=50598029... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G061200.1 | Ceric.32G061200 | not classified & original description: pacid=50597564... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g05129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g11897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16018 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g24061 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g10346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11109 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06841 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07829 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021523001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01031037001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Gb_18830 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_31686 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g10030.1 | LOC_Os08g10030 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g07805 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g36497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02093 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03080 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04773 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10430861g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_12604g0010 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g10485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11925 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03216 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03833 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04462 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06520 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10011 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g21139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g37389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g14000 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08472 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12504 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16383 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g106020.3.1 | HEN4, Solyc01g106020 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g067210.3.1 | Solyc02g067210 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g034200.3.1 | Solyc03g034200 | RNA-binding KH domain-containing protein RCF3... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g077060.3.1 | Solyc04g077060 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g007810.3.1 | Solyc05g007810 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g048500.3.1 | Solyc08g048500 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53383 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02804 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004486_P005 | Zm00001e004486 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012623_P002 | Zm00001e012623 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037033_P001 | Zm00001e037033 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e039986_P003 | Zm00001e039986 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| No external refs found! |