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  5. LOC_Os06g19730.1

LOC_Os06g19730.1 (PA200, LOC_Os06g19730)


Aliases : PA200, LOC_Os06g19730

Description : Proteasome activator subunit 4 OS=Arabidopsis thaliana (sp|f4jc97|psme4_arath : 2106.0)


Gene families : OG0001792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os06g19730.1

Target Alias Description ECC score Gene Family Method Actions
AT3G13330 PA200 proteasome activating protein 200 0.03 OrthoFinder output from all 47 species
Aev_g01608 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Aop_g10620 PA200 proteasome core particle assembly factor *(PA200) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50963.t1 PA200, Aspi01Gene50963 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440226 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g066030.4.1 PA200, Solyc07g066030 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR021843 PSME4_C 1716 1801
IPR032430 Blm10_mid 507 814
IPR032430 Blm10_mid 309 493
No external refs found!