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  5. LOC_Os06g17870.1

LOC_Os06g17870.1 (LOC_Os06g17870)


Aliases : LOC_Os06g17870

Description : no hits & (original description: none)


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g17870.1

Target Alias Description ECC score Gene Family Method Actions
AT3G25070 RIN4 RPM1 interacting protein 4 0.05 OrthoFinder output from all 47 species
Adi_g001126 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Adi_g042655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045667 RIN4 not classified & original description: CDS=218-763 0.04 OrthoFinder output from all 47 species
Cba_g72840 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004747001 RIN4 External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01030113001 No alias No description available 0.02 OrthoFinder output from all 47 species
Ore_g02301 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g059430.3.1 RIN4, Solyc09g059430 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 37 71
No external refs found!