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  5. LOC_Os06g16080.1

LOC_Os06g16080.1 (LOC_Os06g16080)


Aliases : LOC_Os06g16080

Description : no hits & (original description: none)


Gene families : OG0004834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004834_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g16080.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g27660.1 LOC_Os01g27660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g46100.1 LOC_Os01g46100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g05570.1 LOC_Os02g05570 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g02960.1 CRK8, LOC_Os04g02960 Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
LOC_Os04g08804.1 LOC_Os04g08804 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g08812.1 LOC_Os04g08812 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g16120.1 LOC_Os04g16120 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g21370.1 LOC_Os04g21370 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g08180.1 LOC_Os08g08180 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os09g13330.1 LOC_Os09g13330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g05480.1 LOC_Os10g05480 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g10020.1 LOC_Os10g10020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g25960.1 LOC_Os10g25960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g28140.1 LOC_Os11g28140 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g43170.1 LOC_Os11g43170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g26120.1 LOC_Os12g26120 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os12g27230.1 LOC_Os12g27230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g31050.1 LOC_Os12g31050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g35830.1 LOC_Os12g35830 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g37190.1 LOC_Os12g37190 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!