1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g16060.1

LOC_Os06g16060.1 (LOC_Os06g16060)


Aliases : LOC_Os06g16060

Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g16060.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00056710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AMTR_s00008p00185200 ATL6,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00211560 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00152p00054630 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G04360 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G53010 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G63840 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G27940 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.08 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G42360 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G03550 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G10910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G19140 DNF RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G43430 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62690 ATL5 AtL5 0.04 OrthoFinder output from all 47 species
AT4G09100 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G09110 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G05280 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G41400 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G41440 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G53110 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G57750 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.04 OrthoFinder output from all 47 species
Adi_g012395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g048849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g056858 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g057160 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g118032 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g15196 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g00767 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g01244 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g09797 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g12649 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g13299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g19891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22077 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g28428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34169 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g12786 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g15749 RHA3A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27941 RHA3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46662 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g52164 ATL8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57614 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g01755 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g04035 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g04240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02770 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g06652 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g13710 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g15339 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g21168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26562 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07191.t1 Aspi01Gene07191 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12530.t1 Aspi01Gene12530 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41078.t1 Aspi01Gene41078 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43910.t1 Aspi01Gene43910 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene45023.t1 Aspi01Gene45023 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46830.t1 Aspi01Gene46830 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46831.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65294.t1 Aspi01Gene65294 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g26664 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g27531 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g37234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G080900.1 Ceric.06G080900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057700.1 Ceric.07G057700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.09G091200.1 Ceric.09G091200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.11G079100.1 Ceric.11G079100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.21G001000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.21G001200.1 Ceric.21G001200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.25G065700.1 Ceric.25G065700 not classified & original description: pacid=50593844... 0.03 OrthoFinder output from all 47 species
Ceric.29G079700.1 Ceric.29G079700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.33G012100.1 Ceric.33G012100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.36G023100.1 Ceric.36G023100 not classified & original description: pacid=50568780... 0.04 OrthoFinder output from all 47 species
Dac_g13678 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g22588 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g32939 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g00774 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g00990 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g03809 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g06871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g07519 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g14309 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g23802 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g25638 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g40176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00708 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g05299 BRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06688 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g24499 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g25748 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26130 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g26675 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g29562 ATL2, TL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30092 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012018001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012019001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_05005 BRH1 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_05381 No alias RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
Gb_20666 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_28980 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Gb_40635 RHA2A RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11460.1 ATL43, LOC_Os01g11460 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g11480.1 LOC_Os01g11480 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g11490.1 LOC_Os01g11490 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g11500.1 LOC_Os01g11500 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os02g58540.1 LOC_Os02g58540 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g49160.1 LOC_Os04g49160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
LOC_Os05g36310.1 LOC_Os05g36310 RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g39260.1 LOC_Os05g39260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06150.1 LOC_Os06g06150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g08820.1 LOC_Os06g08820 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g00972 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g29571 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53832 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g12876 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g27559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10434759g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_105533g0010 ATL8 RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_124750g0010 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_152783g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_177673g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_189618g0010 ATL8 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_201864g0010 RHA3A RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_226198g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_31736g0010 BRH1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_41514g0010 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_61738g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8693914g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp6g19130.1 ATL1F no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g01610 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g09561 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g12835 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g13489 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g28489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32480 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g38764 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g47443 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g04641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14103 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g00818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g14691 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g16906 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g18004 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g32953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g11739 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g17673 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g26309 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g44046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44351 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g46507 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50189 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g21587 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pnu_g21782 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g02738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g29641 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g35708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42004 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g43947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44095 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g46048 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008065 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015449 No alias not classified & original description: CDS=1-711 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017298 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019562 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023101 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023798 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025158 No alias not classified & original description: CDS=1-642 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025249 No alias not classified & original description: CDS=1-534 0.02 OrthoFinder output from all 47 species
Sam_g06931 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g28688 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g37451 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g52337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006910.4.1 Solyc01g006910 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc01g095810.3.1 Solyc01g095810 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc02g083660.1.1 Solyc02g083660 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc03g005490.4.1 Solyc03g005490 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g123690.1.1 Solyc03g123690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g074790.3.1 Solyc04g074790 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc04g081890.1.1 Solyc04g081890 E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc06g007230.2.1 ATL2, TL2, Solyc06g007230 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc09g089890.1.1 Solyc09g089890 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g081780.3.1 Solyc10g081780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g005320.1.1 Solyc11g005320 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g055710.1.1 ATL3, Solyc12g055710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g094690.1.1 Solyc12g094690 RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g01259 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02204 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g03047 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g08710 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g11356 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g17415 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g31385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42431 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g16305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20442 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26609 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30825 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g31919 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34059 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e001923_P001 ATL3, Zm00001e001923 RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e009988_P001 ATL6, Zm00001e009988 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e014709_P001 Zm00001e014709 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e015796_P001 Zm00001e015796 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e016470_P001 Zm00001e016470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e023585_P001 Zm00001e023585 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e031442_P001 Zm00001e031442 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 89 132
No external refs found!